rosa — ROSA (Response-Oriented Sequential Alternation)¶
Group: Multi-block / cross-modal · Registry tolerance: 1e-06
Description¶
ROSA — Response-Oriented Sequential Alternation (§19)
Registry note — Canonical multiblock ROSA (Liland, Næs & Indahl 2016). Both references implement the canonical formulation; pls4all matches them bit-for-bit (max_abs < 1e-6) for single-target Y. The R reference centers multi-target Y incorrectly (recycles
colMeans(y)rather than broadcasting), so multi-target parity is intentionally evaluated against the NumPy reference.
Parameters¶
Name |
Type |
Default |
Notes |
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registry benchmark cell value |
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registry benchmark cell value |
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registry benchmark cell value |
Explanations¶
Bibliographic source¶
Liland, K. H., Næs, T. & Indahl, U. G. (2016). ROSA—a fast extension of partial least squares regression for multiblock data analysis. Journal of Chemometrics 30(11), 651–662. DOI 10.1002/cem.2824.
Mathematical principle¶
ROSA is a forward-greedy multi-block PLS: at each component extraction step, it tries one new component from every block and keeps the block whose new component most reduces residual variance in \(\mathbf{y}\). The component sequence is therefore data-driven rather than pre-specified by the user.
This auto-attribution makes ROSA a strong default when the analyst has no prior on which block matters most: the block budget is allocated dynamically. ROSA is also much faster than SO-PLS for large block counts because it adds one component per iteration rather than refitting an inner PLS per block.
Output includes the block-attribution vector — the sequence of block indices selected — which is the main interpretive artefact: it tells you which block contributed which component, in order.
Appropriate uses¶
Response-oriented sequential extraction across blocks when each component should be assigned to a contributing block.
Limits and validation¶
Greedy block selection and block scaling can change the extraction order and the resulting interpretation.
Implementation¶
n4m_estimators_rosa_fit. Reference: CRAN multiblock 0.8.10.
Sources and provenance¶
Current implementation: cpp/src/core/extra_pls.cpp.
API and bindings¶
C ABI (ABI 2): n4m_estimators_rosa_fit. Use the linked public header for the exact signature, configuration, and result handles.
Python: no current AST-verified public n4m re-export was found for this method. The linked C ABI above is the documented surface in this checkout.
R (source-verified): rosa_fit(X, Y, n_components, block_sizes).
The source signature has additional required inputs, so no example call is fabricated.
MATLAB / Octave (source-verified): rosa(X, Y, n_components, block_sizes).
The source signature has additional required inputs, so no example call is fabricated.
Registry parity references 📐
📐
ref.python_numpy(python · python) —numpy2.2.6 · strict (rmse_rel ≤ 1e-06) — Canonical multiblock ROSA in NumPy (Liland, Næs & Indahl 2016). Reproduces Rmultiblock::rosa(canonical=TRUE)exactly for single-target Y; for q >= 2 it uses proper column-mean centering and diverges from Rmultiblockbecause that package recyclescolMeans(y)incorrectly. pls4all matches this NumPy reference for q == 1 at IEEE round-off.📐
ref.r_multiblock(R · r) —multiblock0.8.10 · strict (rmse_rel ≤ 1e-06) — Rmultiblock::rosa 0.8.10(Liland, Næs & Indahl 2016). ROSA’s greedy block-selection-per-component may diverge from pls4all’s ordering — tolerance widened.
Benchmarks¶
Archived measurement identity. Backend labels in this table are the raw IDs recorded when the benchmark ran (including historical pls4all.* IDs). They preserve measurement provenance and do not describe a current public Python, R, or MATLAB binding; use the source-verified API and bindings section above for current entry points.
Adaptive wall-clock per cell measured against full_matrix.csv. Only backends that implement this method are listed; libraries without the method are omitted.
Verdict · ✓ ref / ≈ ref / ~ shape mark a reference-gate pass at strict / relaxed / qualitative tolerance · ✓ bind = archived binding-harness result agrees with the C++ baseline · ⇄ cross-check = documented by-design selector/RNG/model, noncanonical API/facade convention, or secondary oracle · ✗ divergent · ⚠ error · — not run. The fastest backend per column is marked 🏆.
Reference gate: strict — numeric equivalence (rmse_rel_tol ≤ 1e-06).
Rows tagged with 📐 are the canonical parity references for this method (declared in parity_timing.registry). C++ and external rows show reference parity; archived language-harness rows show binding parity against the C++ backend. Hover the icon for role and tolerance band.
| Backend | Parity | 200×30 (ms) |
|---|---|---|
| C++ native · libn4m | ||
pls4all.cpp.blas+omp | ✓ ref 2e-16 | 7.07 ms |
| Python · archived pls4all benchmark | ||
pls4all.python | ✓ bind | 2.41 ms |
pls4all.sklearn | ✓ bind | 2.56 ms |
| R · archived pls4all benchmark | ||
pls4all.R | ✓ bind | 5.46 ms |
pls4all.R.formula | ✓ bind | 6.38 ms |
pls4all.R.mdatools | ✓ bind | 6.80 ms |
pls4all.R.pls | ✓ bind | 6.68 ms |
| Python · external | ||
📐ref.python_numpy | source | 1.43 ms🏆 |
| R · external | ||
📐ref.r_multiblock | ⇄ +1e-15 | 2.9 s |
| Backend | Parity | 200×30 (ms) |
|---|---|---|
| C++ native · libn4m | ||
pls4all.cpp.blas+omp | ✓ ref 2e-16 | 1.24 ms🏆 |
| Python · archived pls4all benchmark | ||
pls4all.python | ✓ bind | 1.36 ms |
pls4all.sklearn | ✓ bind | 1.42 ms |
| R · archived pls4all benchmark | ||
pls4all.R | ✓ bind | 3.82 ms |
pls4all.R.formula | ✓ bind | 4.80 ms |
pls4all.R.mdatools | ✓ bind | 5.17 ms |
pls4all.R.pls | ✓ bind | 4.86 ms |
| Python · external | ||
📐ref.python_numpy | source | 6.48 ms |
| R · external | ||
📐ref.r_multiblock | ⇄ +1e-15 | 1.8 s |
| Backend | Parity | 200×30 (ms) |
|---|---|---|
| C++ native · libn4m | ||
pls4all.cpp.blas+omp | ✓ ref 2e-16 | 1.33 ms🏆 |
| Python · archived pls4all benchmark | ||
pls4all.python | ✓ bind | 1.99 ms |
pls4all.sklearn | ✓ bind | 1.42 ms |
| R · archived pls4all benchmark | ||
pls4all.R | ✓ bind | 4.13 ms |
pls4all.R.formula | ✓ bind | 4.17 ms |
pls4all.R.mdatools | ✓ bind | 23.1 ms |
pls4all.R.pls | ✓ bind | 15.6 ms |
| Python · external | ||
📐ref.python_numpy | source | 6.60 ms |
| R · external | ||
📐ref.r_multiblock | ⇄ +1e-15 | 2.2 s |
See also: benchmark overview · methods index · interactive dashboard